SRX4623957
ChIP-seq for SUZ12 in mouse oligodendrocytes: BAC

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Suz12

Cell type

Cell type Class
Neural
Cell type
Oligodendrocytes
NA
NA

Attributes by original data submitter

Sample

strain
FVB/N
dev_stage
1 month
sex
male
tissue
oligodendrocyte
factor
SUZ12
condition
BAC

Sequenced DNA Library

library_name
suz12_bac
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 4000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
269599650
Reads aligned (%)
96.2
Duplicates removed (%)
24.6
Number of peaks
26552 (qval < 1E-05)

mm9

Number of total reads
269599650
Reads aligned (%)
0.0
Duplicates removed (%)
25.0
Number of peaks
26776 (qval < 1E-05)

Base call quality data from DBCLS SRA